cwltool.pack

Reformat a CWL document and all its references to be a single stream.

Attributes

LoadRefType

Functions

find_run(d, loadref, runs)
find_ids(d, ids)
replace_refs(d, rewrite, stem, newstem)	Replace references with the actual value.
import_embed(d, seen)
pack(loadingContext, uri[, rewrite_out, loader])

Module Contents

cwltool.pack.LoadRefType

cwltool.pack.find_run(d, loadref, runs)

Parameters:

• d (cwl_utils.types.CWLObjectType | schema_salad.utils.ResolveType)

• loadref (LoadRefType)

• runs (set[str])

Return type:

None

cwltool.pack.find_ids(d, ids)

Parameters:

• d (cwl_utils.types.CWLObjectType | cwl_utils.types.CWLOutputType | collections.abc.MutableSequence[cwl_utils.types.CWLObjectType] | None)

• ids (set[str])

Return type:

None

cwltool.pack.replace_refs(d, rewrite, stem, newstem)

Replace references with the actual value.

Parameters:

• d (Any)

• rewrite (dict[str, str])

• stem (str)

• newstem (str)

Return type:

None

cwltool.pack.import_embed(d, seen)

Parameters:

• d (collections.abc.MutableSequence[cwl_utils.types.CWLObjectType] | cwl_utils.types.CWLObjectType | cwl_utils.types.CWLOutputType | None)

• seen (set[str])

Return type:

None

cwltool.pack.pack(loadingContext, uri, rewrite_out=None, loader=None)

Parameters:

• loadingContext (cwltool.context.LoadingContext)

• uri (str)

• rewrite_out (dict[str, str] | None)

• loader (schema_salad.ref_resolver.Loader | None)

Return type:

cwl_utils.types.CWLObjectType