Raptor
3.0.1
A fast and space-efficient pre-filter for querying very large collections of nucleotide sequences
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max_count_per_partition.hpp
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// --------------------------------------------------------------------------------------------------
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// Copyright (c) 2006-2023, Knut Reinert & Freie Universität Berlin
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// Copyright (c) 2016-2023, Knut Reinert & MPI für molekulare Genetik
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// This file may be used, modified and/or redistributed under the terms of the 3-clause BSD-License
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// shipped with this file and also available at: https://github.com/seqan/raptor/blob/main/LICENSE.md
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// --------------------------------------------------------------------------------------------------
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#pragma once
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#include <
string
>
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#include <
vector
>
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#include <
raptor/argument_parsing/build_arguments.hpp
>
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#include <
raptor/argument_parsing/upgrade_arguments.hpp
>
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#include <
raptor/build/partition_config.hpp
>
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namespace
raptor
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{
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std::vector<size_t> max_count_per_partition(
partition_config
const
& cfg,
build_arguments
const
& arguments);
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std::vector<size_t> max_count_per_partition(
partition_config
const
& cfg,
upgrade_arguments
const
& arguments);
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}
// namespace raptor
build_arguments.hpp
Provides raptor::build_arguments.
partition_config.hpp
Provides raptor::partition_config.
string
raptor::build_arguments
Definition
build_arguments.hpp:28
raptor::partition_config
Definition
partition_config.hpp:23
raptor::upgrade_arguments
Definition
upgrade_arguments.hpp:24
upgrade_arguments.hpp
Provides raptor::upgrade_arguments.
vector
raptor
build
max_count_per_partition.hpp
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