Package org.snpeff.nextProt
Class NextProtXmlEntry
java.lang.Object
org.snpeff.nextProt.NextProtXmlNode
org.snpeff.nextProt.NextProtXmlEntry
Mimics the 'entry' in a NextProt XML file
- Author:
- Pablo Cingolani
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Constructor Summary
Constructors -
Method Summary
Modifier and TypeMethodDescriptionvoid
add
(NextProtXmlAnnotation ann) Add an annotationvoid
addIsoformSequence
(String isoformAccession, String sequence) Add an Isoform sequencevoid
addMarkers
(NextProtMarkerFactory markersFactory) Create all Markers for this entrySet<org.snpeff.nextProt.Identifier>
getIsoform
(String isoformAccession) Get or create an isoformgetOrCreateIsoform
(String isoformAccession) toString()
Methods inherited from class org.snpeff.nextProt.NextProtXmlNode
getAccession
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Constructor Details
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NextProtXmlEntry
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Method Details