Package org.snpeff.stats
Class VariantTypeStats
java.lang.Object
org.snpeff.stats.VariantTypeStats
- All Implemented Interfaces:
SamplingStats<VcfEntry>
Count variant types (SNP, MNP, INS, DEL)
- Author:
- pablocingolani
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Field Summary
Fields -
Constructor Summary
Constructors -
Method Summary
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Field Details
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MAX_MAC
public static final int MAX_MAC- See Also:
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Constructor Details
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VariantTypeStats
public VariantTypeStats()
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Method Details
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hasData
public boolean hasData()Description copied from interface:SamplingStats
Does this statistic have any data?- Specified by:
hasData
in interfaceSamplingStats<VcfEntry>
- Returns:
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sample
Update MAC counters- Specified by:
sample
in interfaceSamplingStats<VcfEntry>
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toString
Show results to stdout
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