Uses of Class
org.snpeff.snpEffect.Hgvs

Packages that use Hgvs
Package
Description
 
  • Uses of Hgvs in org.snpeff.snpEffect

    Subclasses of Hgvs in org.snpeff.snpEffect
    Modifier and Type
    Class
    Description
    class 
    Coding DNA reference sequence References http://www.hgvs.org/mutnomen/recs.html Nucleotide numbering: - there is no nucleotide 0 - nucleotide 1 is the A of the ATG-translation initiation codon - the nucleotide 5' of the ATG-translation initiation codon is -1, the previous -2, etc.
    class 
    Coding change in HGVS notation (amino acid changes) References: http://www.hgvs.org/mutnomen/recs.html