Class Gff3FileIterator

All Implemented Interfaces:
Iterable<GffMarker>, Iterator<GffMarker>

public class Gff3FileIterator extends MarkerFileIterator<GffMarker>
Opens a sequence change file and iterates over all intervals in GFF3 format.
Author:
pcingola
  • Constructor Details

    • Gff3FileIterator

      public Gff3FileIterator(String fileName)
    • Gff3FileIterator

      public Gff3FileIterator(String fileName, Genome genome)
    • Gff3FileIterator

      public Gff3FileIterator(String fileName, Genome genome, int inOffset)
  • Method Details